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CVF · CVPR 2026:cvf:58fe4c74f53ba285572b99720af734b6 · 记录 #1

BiGMINT: Biologically-guided Hierarchical Multimodal Integration for Modeling Multiple Compound Activities in Drug Discovery

来源日期(仅到年份) 2026
来源记录日期 2026
雷达观测 2026-11-05 00:18
CVF · CVPR 2026 ↗PDF ↗

摘要

Compound activity modeling is critical for drug discovery, where accurate *in silico* predictions can significantly reduce reliance on expensive, time-consuming target-specific experimental assays. Traditional machine learning approaches for compound activity modeling typically rely on either chemoproteomics-centric molecular data or phenotype-centric imaging screens, limiting their ability to capture complementary biological signals. While multimodal approaches show promise, they often fail to capture the interplay between molecular mechanisms and cellular responses. In this paper, we present **BiGMINT**, a **Bi**ologically **G**uided **M**ultimodal framework that hierarchically **INT**egrates chemoproteomic and high-content imaging (HCI) data, introducing chemoproteomics-guided phenotypic aggregation, task-aware cross-modal fusion, and protein-protein interaction priors for modeling activities. On two large-scale in-house datasets, with 99K and 40K compound-HCI pairs from U2OS and iNeuron, **BiGMINT** improves mean AUCROC by up to 10.0% and 4.2%, and high-performing task coverage by up to 103% and 56% over best unimodal and multimodal methods. Thorough analysis revealed mechanistic insights, showing these gains stem from modality complementarity, and protein-protein priors enhance modeling of challenging activities.

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记录 #1 · 2026 · 最新观测版本

BiGMINT: Biologically-guided Hierarchical Multimodal Integration for Modeling Multiple Compound Activities in Drug Discovery

Compound activity modeling is critical for drug discovery, where accurate *in silico* predictions can significantly reduce reliance on expensive, time-consuming target-specific experimental assays. Traditional machine learning approaches for compound activity modeling typically rely on either chemoproteomics-centric molecular data or phenotype-centric imaging screens, limiting their ability to capture complementary biological signals. While multimodal approaches show promise, they often fail to capture the interplay between molecular mechanisms and cellular responses. In this paper, we present **BiGMINT**, a **Bi**ologically **G**uided **M**ultimodal framework that hierarchically **INT**egrates chemoproteomic and high-content imaging (HCI) data, introducing chemoproteomics-guided phenotypic aggregation, task-aware cross-modal fusion, and protein-protein interaction priors for modeling activities. On two large-scale in-house datasets, with 99K and 40K compound-HCI pairs from U2OS and iNeuron, **BiGMINT** improves mean AUCROC by up to 10.0% and 4.2%, and high-performing task coverage by up to 103% and 56% over best unimodal and multimodal methods. Thorough analysis revealed mechanistic insights, showing these gains stem from modality complementarity, and protein-protein priors enhance modeling of challenging activities.

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