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新论文 · v1arXiv:2611.03731

Complete Donor-Set Guidance for Frozen Diffusion Docking Models

Hyunwoo Kim, Insoo Park, Ziseok Lee, Wooyeol Lee, Yoorim Gang, Kyungsu Kim

Metalloprotein docking requires a ligand pose to satisfy both global pocket fit and the identity and geometry of metal-coordinating atoms. General-purpose diffusion docking models do not explicitly condition generation on externally specified complete ligand donor sets, and their predicted poses can exhibit incorrect metal-donor relationships. Metal-aware models address coordination during training and generation; here we ask whether external donor information can correct already-trained general-purpose models without retraining. We propose Complete-Identity Contract Guidance (CICG), which applies a supplied complete donor set through translation, rotation, and torsion updates, and Historical Contract Transfer (HCT), which supplies donor identities from earlier complexes at compatible receptor sites. We compare HCT with trajectory-local controls retaining the historical donor count with or without elemental composition. On 86 assessable HCT-covered queries, HCT-guided CICG increases frozen-confidence-selected joint success from 21.5% to 36.6% on SurfDock and from 25.0% to 34.9% on DiffDock-L. The joint criterion requires correct global ligand placement, complete native donor recovery, coordination geometry, preserved stereochemistry, and absence of fatal receptor clashes. Composition-matched guidance reaches 33.14% and 34.30%, leaving the additional benefit of fixed historical membership unresolved. Our results therefore support donor-set guidance as a conditional correction for frozen docking models, while identifying donor-source reliability and physical-quality preservation as the main barriers to broader use.

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physics.chem-ph · cs.LG
arXiv ↗PDF ↗
新论文 · v1arXiv:2610.39179

Edited Endpoints as Partial Goals for Image-to-Video Generation

Sihyun Kim, Sanghyun Jo, Kyungsu Kim

Edited endpoint images make the target of an image-to-video transition explicit and can improve transition completion, but also preserve context in the source image's layout. Full-frame endpoint conditioning turns this preserved context into requirements on the video's final state, potentially inducing temporal artifacts. We measure discontinuity with Hard-Cut (HC), late background reversal with Background Motion Reversal (BMR), and motion suppression with Dynamic Degree (DD). These artifacts appear across five video models spanning training-free and learned endpoint conditioning, in model-specific forms. We study Partial, a selective conditioning scheme that constrains only an edit-relevant region estimated from image-editor attention and leaves the remaining terminal content to the video model. Across three backbones on TC-Bench-I2V, Partial reduces temporal artifacts relative to full-frame conditioning, with no significant difference in Transition Completion Ratio (TCR); on Wan2.2-Turbo, uniformly weakening conditioning does not reproduce these reductions. A donor-context intervention keeps full-frame conditioning and replaces only the context outside the edit-relevant region with the final frame of a Partial video. It lowers HC and BMR on HunyuanVideo-1.5 and lowers BMR while restoring DD on Wan2.2-Turbo, with no significant difference in TCR, so constraint extent alone does not account for these artifacts. Together, these findings suggest that edited endpoints should serve as partial future goals, although edit relevance does not guarantee future validity. Code and data will be released at https://github.com/wannagetacat/Edited-Endpoints-I2V.

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cs.CV
arXiv ↗PDF ↗