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新论文 · v1arXiv:2611.15668

Beyond Reweighting: Certified Improvements from New Transitions in Discrete MCMC

Yishan Xi, Tinglan Wang

原文摘要

Optimizing transition probabilities on a fixed grap may leave substantial limitations on the efficiency of reversible Markov chain Monte Carlo (MCMC). We develop a framework for transition-support design that considers both allowed transitions and their stationary flows. For a fixed target distribution, observable, and node-flow budget, we derive a necessary and sufficient dual condition for support augmentation to strictly reduce the optimal value of the asymptotic variance, together with computable primal--dual certificates that establish improvements over every admissible original-support reweighting. We also construct a family in which adding a single edge reduces integrated autocorrelation time by an $Ω(n)$ factor relative to optimal original-support weighting, demonstrating that structural limitations can impose arbitrarily large relative losses in estimation efficiency. To realize these gains, we investigate energy-informed edge selection and constrained stationary-flow optimization. Experiments on molecular and Ising state graphs distinguish the potential value of new transitions from the performance of kernels constructed on them: on identical augmented Ising supports, full weight optimization certifies strict improvements in 24/24 conditions, whereas degree-based Metropolis--Hastings weighting certifies none. Our results provide a principled approach to characterizing, certifying, and exploiting transition-support improvements in explicitly represented finite state spaces.

cs.LG

新论文 · v1arXiv:2611.15109

Expanding the Decision Space of Pretrained Models through Structured Re-Decoding

Tinglan Wang, Qun Su, Shihang Wang, Chi Wang, Lin Wang, Shaobo Chen, Haixu Liu, Hai Wei 等 14 位作者

原文摘要

Native decoders limit how pretrained models combine local predictions under new structural constraints. We introduce Structured Re-Decoding (SRD), a training-free framework that constructs local candidates from model scores, samples, or external specifications, jointly optimizes their selection, and verifies reconstructed outputs. We show that candidate recombination expands feasible support and can improve attainable reward under a fixed KL divergence budget. Across molecular generation, protein design, RNA structure prediction, and antibody modeling, SRD enables improved structured inference, including verified molecules absent from the original sample pool. External chemical templates further extend SRD to noncanonical amino acids, peptide cyclization, and grammar-guided molecular construction. Preliminary experiments on a physical coherent Ising machine demonstrate the feasibility of hardware-based optimization, suggesting broader opportunities for quantum and quantum-inspired approaches to structured inference and combinatorial optimization across scientific domains.

cs.AI · q-bio.BM