AI 速览:作者提出基于大语言模型的智能体 ClinGeX,通过检索与依赖感知编排 105 个可执行技能来辅助临床基因组解读,并在基准与人类-AI 协作研究中报告了优于对照的表现。
Clinical genomic analysis requires experts to integrate evolving guidelines, databases, and computational evidence. As sequencing has become increasingly accessible, this complex and labor-intensive process has become a major bottleneck to the timely use of genomic information in clinical decision-making. To fill this gap, we developed ClinGeX, a large-language-model agent that composes 105 curated executable skills through task-specific retrieval and dependency-aware orchestration. On 223 temporally held-out benchmark cases, ClinGeX achieved 71.7\% macro-averaged task-level concordance with expert reference classifications, compared with 45.7\% for the strongest comparator. In a three-condition, counterbalanced human-AI collaboration study, 45 clinical genomic professionals assessed 135 clinically derived cases under routine (no AI assistance), DeepSeek-assisted and ClinGeX-assisted conditions. ClinGeX assistance increased raw case-level concordance across criterion-level variant analysis, genomic interpretation in rare disease and molecular oncology decision-making (51.1\%, 57.8\%, 64.4\% versus 15.6\%, 31.1\%, 20.0\% in comparator conditions) and reduced reported interpretation time in all scenarios. During an exploratory one-month real-world non-interventional assessment, 11 experienced professionals submitted feedback on 96 self-selected analysis episodes and reported frequent conclusion adoption and time savings. These findings support executable domain skills as a promising approach to augment specialist genomic interpretation.
Xucheng Wang, Zhizhou Yang, Sung Eun Kim, Romain Hardy, Michael P. Sampson, Aakash Reddy, Ankit Pal, Xiaoman Zhang 等 10 位作者
We demonstrate the first zero-shot sim-to-real transfer for a surgeon-robot collaboration task in open surgery: retractor take-over. A robot arm takes a retractor from the surgeon's hand and preserves retraction at handoff, using a policy trained only on simulated demonstrations, without human demonstrations or real-world fine-tuning. Imitation learning from real demonstrations is limited by collection and labeling costs, and by performance degradation when the environment changes. Our framework, SimRetract, generates simulated demonstrations designed for transfer: the policy observes masked instrument images and grasp geometry, learns to recover from off-nominal states, and acts with margin for execution drift. Deployed zero-shot, it grasps the retractor in 90% of 50 surgeon-defined phantom presentations and preserves retraction at handoff in 78%. Results on unseen retractors suggest potential for generalization to instruments with similar grasp geometry. Across ten policy configurations and 1,200 simulated and real trials, we localize the sim-to-real gap to components: in simulation, grasp rates across ablations span 80-96%, while on the real robot removing the instrument mask alone drops performance to 22% grasped and 12% held. Transfer-oriented design thus makes zero-shot sim-to-real transfer feasible for a surgical assistance task without human demonstrations. Code is available here: https://anonymous.4open.science/r/simretract-58D2.
Vision-language models (VLMs) are increasingly proposed as general-purpose tools for scientific data interpretation, yet their reliability on real astronomical observations across diverse modalities remains untested. We present AstroVLBench, a benchmark of over 4,100 expert-verified instances across five tasks spanning optical imaging, radio interferometry, multi-wavelength photometry, time-domain light curves, and optical spectroscopy. We systematically evaluate six state-of-the-art frontier models and find that performance is strongly modality-dependent and uncorrelated with general benchmark rankings. Mechanistic cross-model ablations reveal three concrete bottlenecks. First, prompt grounding exhibits marked model and task dependence: physical guidance yields more balanced classifications on optical imaging, whereas phenomenological prompts better navigate undersampled time-domain data. Second, presenting one-dimensional measurements as numerical tables rather than rendered plots consistently improves light-curve classification across all models by up to 23 percentage points, demonstrating that plot rendering can obscure physically relevant signal. Third, an expert audit of optical spectroscopy reveals a notable "right-answer-wrong-reason" phenomenon: across evaluated models, an average of 26% of correct predictions are accompanied by physically inconsistent or invalid reasoning chains, showing that accuracy alone is insufficient for trustworthy scientific deployment. AstroVLBench provides the first systematic, multi-modal baselines for VLMs in observational astronomy and identifies the representation, grounding, and reasoning bottlenecks that must be addressed before VLMs can be trusted as autonomous scientific interpreters.