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新论文 · v1arXiv:2611.11644

MICE: Multi-animal Interaction Context Encoder - A Hierarchical Foundation Model for Mouse Behavior

Yen-Shuo Su, Weihan Li, Anqi Wu

原文摘要

Quantifying mouse behavior from pose is a foundational tool in neuroscience, ethology, drug discovery, and animal welfare. Self-supervised foundation models are a natural fit, but a foundation model for mouse behavior must handle social behavior - many behaviors that matter (aggression, courtship, mounting, allogrooming) are inherently multi-animal. Existing self-supervised pose models fall short: they encode each animal independently and discard interaction signal, hard-code the animal count, and pretrain one dataset at a time. We introduce MICE (Multi-animal Interaction Context Encoder), a hierarchical foundation model for mouse behavior that pretrains jointly on six mouse-pose corpora spanning one to four mice and 7 to 27 keypoints. MICE combines a hierarchical individual encoder capturing per-mouse kinematics at multiple temporal scales with a Perceiver-style social encoder whose learned latent codebook decouples parameter count from animal count, so a single checkpoint serves any group size without retraining. Across four evaluation protocols spanning six datasets, MICE matches or exceeds prior keypoint-based baselines, and layer-wise probing shows the social stage incrementally improves discriminability beyond the individual encoder. Code, weights, and data are available at https://github.com/eric0708/MICE.

cs.CV · cs.LG · q-bio.NC

版本更新 · v4arXiv:2506.15190

Learning Reusable Behavioral Motifs for Continuous Animal Behavior Modeling

Jiyi Wang, Jingyang Ke, Bo Dai, Anqi Wu

原文摘要

Natural behavior evolves continuously and often reuses movement structure across contexts, but existing behavioral segmentation methods typically assign a single discrete syllable at each time point or impose restrictive generative assumptions. We introduce Motif-based Continuous Dynamics (MCD), a computational framework that models behavior as time-varying combinations of reusable behavioral motifs. MCD learns motifs as latent behavior-level features from transition dynamics, through spectral representation learning within a reinforcement learning framework. MCD then infers policies that combine these motifs across time or context, through offline imitation learning. This formulation avoids hard behavioral boundaries while capturing continuity and compositionality. Across simulated gridworld and continuous-control tasks, mouse maze navigation and pose data, MCD identifies reusable motifs that explain task and temporal variation. MCD therefore provides a flexible and interpretable framework for computational behavior analysis. Code is available in https://github.com/G1NO3/MCD.

cs.LG · q-bio.NC